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The Gunung Palung Orangutan Project has conducted research on critically endangered wild Bornean orangutans (Pongo pygmaeus wurmbii) since 1994 in Gunung Palung National Park, West Kalimantan, Indonesia. A major goal of our broad-ranging research on orangutan behavior and ecology is to understand how the unique rainforest environment of Southeast Asia, characterized by dramatic changes in fruit productivity due to unpredictable mast fruiting, impacts orangutan behavior, physiology, and health. Much of our research has been devoted to the development of non-invasive techniques and an integrated biology approach – using hormonal assays, fecal processing, nutritional analysis, genetics, and behavioral ecology – and has led to an increased understanding of the ecological and evolutionary pressures shaping orangutan adaptations. Our results show that the extended life history and very slow reproductive rate of orangutans are adaptations to their environment. Orangutans in the Gunung Palung landscape, as elsewhere across Borneo and Sumatra, also face a series of conservation challenges, including extensive habitat loss and the illegal pet trade. We highlight how our investigations of orangutan health status, ecosystem requirements, and the assessment of orangutan density using ground and drone nest surveys have been applied to conservation efforts. We describe our project’s direct conservation interventions of public education and awareness campaigns, sustainable livelihood development, establishment of village-run customary forests, investigation of the illegal pet trade, and active engagement with Indonesian government organizations. These efforts, in concert with the development of local scientific and conservation capacity, provide a strong foundation for further conservation as orangutans face a challenging future.